Package: kinograte 0.0.2.9000

Khaled Alganem

kinograte: Kinograte: Netwrok-based multi-omics Integration

Netwrok-based multi-omics integration using a prize-collecting Steiner forest (PCSF) algorithm.

Authors:Khaled Alganem [aut, cre]

kinograte_0.0.2.9000.tar.gz
kinograte_0.0.2.9000.zip(r-4.7)kinograte_0.0.2.9000.zip(r-4.6)kinograte_0.0.2.9000.zip(r-4.5)
kinograte_0.0.2.9000.tgz(r-4.6-any)kinograte_0.0.2.9000.tgz(r-4.5-any)
kinograte_0.0.2.9000.tar.gz(r-4.7-any)kinograte_0.0.2.9000.tar.gz(r-4.6-any)
kinograte_0.0.2.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
kinograte/json (API)

# Install 'kinograte' in R:
install.packages('kinograte', repos = c('https://cogdisreslab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cogdisreslab/kinograte/issues

Datasets:

On CRAN:

Conda:

1.70 score 3 scripts 8 exports 101 dependencies

Last updated from:28859ba6f5. Checks:7 WARNING, 1 ERROR, 1 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64WARNING200
source / vignettesERROR214
linux-release-x86_64WARNING170
macos-release-arm64WARNING103
macos-oldrel-arm64WARNING116
windows-develWARNING115
windows-releaseWARNING127
windows-oldrelWARNING168
wasm-releaseOK177

Exports:%>%combine_scoreskinogratenetwork_enrichmentpercentile_rankscore_plottop_hitsvisualize_network

Dependencies:AnnotationDbiaskpassbackportsbase64encBHBiobaseBiocGenericsBiostringsbitbit64blobbroombslibcachemclicommonmarkcorrplotcountrycodecpp11crayoncurlDBIdigestdplyrecharts4revaluatefarverfastmapfontawesomefsgenericsggplot2glueGO.dbgraphgtablehighrhtmltoolshtmlwidgetshttpuvhttrigraphIRangesisobandjquerylibjsonliteKEGGRESTknitrlabelinglaterlatticelifecyclemagrittrMatrixmatrixStatsmemoisemimeopensslorg.Hs.eg.dbotelPCSFpillarpkgconfigpngpromisespurrrR6rappdirsRColorBrewerRcppreactablereactRrlangrmarkdownRSQLiterstudioapiS4VectorsS7sassscalesSeqinfoshinysourcetoolsSparseMstringistringrsystibbletidyrtidyselecttinytextopGOutf8vctrsviridisLitevisNetworkwithrxfunxtableXVectoryaml