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  1. BioPathNet::hsapiens
    List of pathways and associated genes in homo sapiens
    json| rda| rds
    list
  2. BioPathNet::mmusculus
    List of pathways and associated genes in mus musculus
    json| rda| rds
    list
  3. BioPathNet::rnorvegicus
    List of pathways and associated genes in rattus norvegicus
    json| rda| rds
    list
  4. creedenzymatic::kinome_mp_file
    CDRL Complete mapping file (UKA+KRSA+KEA3+PTM-SEA)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|530 x 36
  5. creedenzymatic::kinome_mp_file_v1
    CDRL Complete mapping file (UKA+KRSA+KEA3+PTM-SEA)
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|503 x 14
  6. creedenzymatic::kinome_mp_file_v2
    CDRL Complete mapping file (UKA+KRSA+KEA3+PTM-SEA)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|514 x 12
  7. creedenzymatic::kinome_mp_file_v3
    CDRL Complete mapping file (UKA+KRSA+KEA3+PTM-SEA)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|530 x 26
  8. creedenzymatic::kinome_mp_file_v4
    CDRL Complete mapping file (UKA+KRSA+KEA3+PTM-SEA)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|527 x 26
  9. creedenzymatic::kinome_mp_file_v5
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|535 x 36
  10. creedenzymatic::kinome_mp_file_v6
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|530 x 36
  11. creedenzymatic::ptk_pamchip_86402_array_layout_ptmsea
    CDRL Complete mapping of peptides - used for ptm-sea (PTK PamChip 86402)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|258 x 2
  12. creedenzymatic::ptk_pamchip_86402_mapping
    CDRL Complete mapping of peptides to HGNC symbols (PTK PamChip 86402)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|193 x 2
  13. creedenzymatic::ptk_pamchip_86402_onlyChipPeps_dbs
    json| rda| rds
    character
  14. creedenzymatic::ptm_sea_iptmnet_mapping_ptk
    json| rda| rds
    character
  15. creedenzymatic::ptm_sea_iptmnet_mapping_stk
    json| rda| rds
    character
  16. creedenzymatic::ptmsea_all_dbs
    json| rda| rds
    character
  17. creedenzymatic::stk_pamchip_87102_array_layout_ptmsea
    CDRL Complete mapping of peptides - used for ptm-sea (STK PamChip 87102)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|598 x 2
  18. creedenzymatic::stk_pamchip_87102_mapping
    CDRL Complete mapping of peptides to HGNC symbols (STK PamChip 87102)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|141 x 2
  19. creedenzymatic::stk_pamchip_87102_onlyChipPeps_dbs
    json| rda| rds
    character
  20. creedenzymatic::uka_db_full
    UKA Complete DB mapping File (STK + PTK)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|11385 x 17
  21. enrichR::background
    Example background genes
    json| rda| rds
    character
  22. enrichR::genes790
    790 gene symbols
    json| rda| rds
    character
  23. enrichR::input
    Example input genes
    json| rda| rds
    character
  24. KinaseTauScore::AzorsaActivity
    Kinase Activity on Phosphorylating Tau Protein
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|3423 x 6
  25. kinograte::kinomics_exmaple
    an example of Kinome data
    csv| xlsx| json| ndjson| rda| rds
    rowwise_df|234 x 2
  26. kinograte::ppi_network_example
    an example of ppi network
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|176205 x 3
  27. kinograte::proteomics_exmaple
    an example of proteomics data
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|141 x 2
  28. kinograte::rnaseq_example
    an example of RNA differential gene expression data
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|3207 x 3
  29. KRSA::ballModel_edges
    Protein-Protein Interactions based on PhosphositePlus database
    csv| xlsx| json| ndjson| rda| rds
    data.frame|592 x 2
  30. KRSA::ballModel_nodes
    Protein-Protein Interactions based on PhosphositePlus database
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|179 x 2
  31. KRSA::KRSA_coverage_PTK_PamChip_86402_v1
    KRSA kinase coverage file for PamChip 86402 PTK (v1 mapping)
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1278 x 2
  32. KRSA::KRSA_coverage_STK_PamChip_87102_v1
    KRSA kinase coverage file for PamChip 87102 STK (v1 mapping)
    csv| xlsx| json| ndjson| rda| rds
    data.frame|2423 x 2
  33. KRSA::KRSA_coverage_STK_PamChip_87102_v2
    KRSA kinase coverage file for PamChip 87102 STK (v2 mapping, removed PDK kinase)
    csv| xlsx| json| ndjson| rda| rds
    data.frame|2422 x 2
  34. KRSA::KRSA_layout_PTK_PamChip_86402_v1
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|204 x 1
  35. KRSA::KRSA_layout_STK_PamChip_87102_v1
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|152 x 1
  36. KRSA::KRSA_Mapping_PTK_PamChip_86402_v1
    KRSA kinase-substrate mapping file for PamChip 86402 PTK (v1 mapping)
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|193 x 2
  37. KRSA::KRSA_Mapping_STK_PamChip_87102_v1
    KRSA kinase-substrate mapping file for PamChip 87102 STK (v1 mapping)
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|141 x 2
  38. KRSA::KRSA_uka_mapping_PTK_PamChip_86402_v1
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|1438 x 11
  39. KRSA::KRSA_uka_mapping_STK_PamChip_87102_v1
    csv| xlsx| json| ndjson| rda| rds
    spec_tbl_df|2106 x 11
  40. KRSA::ptk_pamchip_86402_mapping
    CDRL Complete mapping of peptides to HGNC symbols (PTK PamChip 86402)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|193 x 2
  41. KRSA::stk_pamchip_87102_mapping
    CDRL Complete mapping of peptides to HGNC symbols (STK PamChip 87102)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|141 x 2
  42. PAVER::gsea_example
    An example of GSEA results
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1080 x 4
  43. PAVER::kegg_example
    An example of KEGG results
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|183 x 2
  44. PCSF::STRING
    Protein-protein interaction network data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|175854 x 3
  45. PCSF::Tgfb_phospho
    Phosphoproteomic data
    json| rda| rds
    numeric