Package: KRSA
Title: KRSA: Kinome Random Sampling Analyzer
Version: 1.99.367
Authors@R: 
    c(person(c("Ali", "Sajid"), "Imami", , "Ali.Sajid.Imami@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-3684-3539")),
    person(c("Khaled"), "Alganem", ,"khaled.a.alganem@gmail.com" ,role = "aut", comment = c(ORCID = "0000-0003-4419-3708")))
Description: The goal of this package is to analyze the PamChip data
        and identify the changes in the active kinome. The package can
        preprocess the PamChip data output from BioNavigator and use
        Random Sampling and Permutation Analysis to identify upstream
        kinases. Additionally, this package provides a set of useful
        visualizations for the PamChip data.
License: MIT + file LICENSE
URL: https://github.com/CogDisResLab/KRSA,
        https://cogdisreslab.github.io/KRSA/
Encoding: UTF-8
Imports: magrittr, tibble, readr, stringr, purrr, rlang, dplyr,
        pheatmap, EnvStats, broom, igraph, stats, utils, ggplot2,
        tidyr, ggsignif, httr, jsonlite
Depends: R (>= 4.0.0)
Suggests: knitr, rmarkdown, markdown, tidyverse, gt, furrr, biocthis,
        usethis, gganimate
BugReports: https://github.com/CogDisResLab/KRSA/issues
biocViews: Software
VignetteBuilder: knitr
X-schema.org-applicationCategory: Proteomics
X-schema.org-keywords: Kinase, Phosphatases, PamChip, Kinome, Random
        Sampling, Permutation Analysis
X-schema.org-isPartOf: https://cdrlprojects.org/
Config/testthat/edition: 3
Config/testthat/parallel: TRUE
Roxygen: list(markdown = TRUE)
LazyData: true
Config/roxygen2/version: 8.1.1
Repository: https://cogdisreslab.r-universe.dev
Date/Publication: 2026-10-13 12:32:54 UTC
RemoteUrl: https://github.com/CogDisResLab/KRSA
RemoteRef: HEAD
RemoteSha: 0dbb14328049830fd1373cb559358e194f5a5b44
NeedsCompilation: no
Packaged: 2026-10-13 19:49:49 UTC; root
Author: Ali Sajid Imami [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3684-3539>),
  Khaled Alganem [aut] (ORCID: <https://orcid.org/0000-0003-4419-3708>)
Maintainer: Ali Sajid Imami <Ali.Sajid.Imami@gmail.com>