Package: KRSA
Title: KRSA: Kinome Random Sampling Analyzer
Version: 1.99.354
Authors@R: 
    c(person(c("Ali", "Sajid"), "Imami", , "Ali.Sajid.Imami@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-3684-3539")),
    person(c("Khaled"), "Alganem", ,"khaled.a.alganem@gmail.com" ,role = "aut", comment = c(ORCID = "0000-0003-4419-3708")))
Description: The goal of this package is to analyze the PamChip data
        and identify the changes in the active kinome. The package can
        preprocess the PamChip data output from BioNavigator and use
        Random Sampling and Permutation Analysis to identify upstream
        kinases. Additionally, this package provides a set of useful
        visualizations for the PamChip data.
License: MIT + file LICENSE
URL: https://github.com/CogDisResLab/KRSA,
        https://cogdisreslab.github.io/KRSA/
Encoding: UTF-8
Imports: magrittr, tibble, readr, stringr, purrr, rlang, dplyr,
        pheatmap, EnvStats, broom, igraph, stats, utils, ggplot2,
        tidyr, ggsignif, httr, jsonlite
Depends: R (>= 4.0.0)
Suggests: knitr, rmarkdown, markdown, tidyverse, gt, furrr, biocthis,
        usethis, gganimate
BugReports: https://github.com/CogDisResLab/KRSA/issues
biocViews: Software
VignetteBuilder: knitr
X-schema.org-applicationCategory: Proteomics
X-schema.org-keywords: Kinase, Phosphatases, PamChip, Kinome, Random
        Sampling, Permutation Analysis
X-schema.org-isPartOf: https://cdrlprojects.org/
Config/testthat/edition: 3
Config/testthat/parallel: TRUE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
LazyData: true
Repository: https://cogdisreslab.r-universe.dev
Date/Publication: 2026-01-12 03:56:09 UTC
RemoteUrl: https://github.com/CogDisResLab/KRSA
RemoteRef: HEAD
RemoteSha: ce1209d9e10beb03d37b9107e776493dcd943002
NeedsCompilation: no
Packaged: 2026-07-11 07:27:56 UTC; root
Author: Ali Sajid Imami [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3684-3539>),
  Khaled Alganem [aut] (ORCID: <https://orcid.org/0000-0003-4419-3708>)
Maintainer: Ali Sajid Imami <Ali.Sajid.Imami@gmail.com>